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Phosphate-ON Phosphoramidite

Proligo® Reagents

Product Breadth of Proligo Reagents
Standard Phosphoramidites
Green Arrow  DNA and RNA Pharmadite®
Green Arrow  DNA Phosphoramidite
Green Arrow  2'O-TC RNA Phosphoramidite
Green Arrow  2'O-TBDMS RNA Phosphoramidite
Green Arrow  2'O-Methyl Phosphoramidite
Green Arrow  2'Fluoro Phosphoramidite
Green Arrow  5'-NPPOC DNA Phosphoramidite
Green Arrow  Non-Standard Nucleosides Phosphoramidite

Fast Deprotection Chemistry (FD)
Green Arrow  FD DNA Phosphoramidite
Green Arrow  2'O-TBDMS RNA Phosphoramidite
Supports
Green Arrow  Bulk Controlled Pore Glass (CPG)
 DNA CPG
 RNA CPG
 Amino-ON CPG
 Universal CPG

Columns
Green Arrow  DNA CPG Column
Green Arrow  RNA CPG Column
Green Arrow  DNA Polystyrene Column
Labels and Modifications
Green Arrow  6-FAM
Green Arrow  Fluorescein Phosphoramidite
Green Arrow  Biotin Phosphoramidite
Green Arrow  Phosphate-ON

Linkers
Green Arrow  MMT and TFA Amino Linker
Green Arrow  ssH Linker

Solvents
Green Arrow  Liquid Reagents
Green Arrow  Activator 42®

Phosphate-ON phosphoramidite is a chemical phosphorylation reagent that can be employed to introduce a phosphate group at the 5’ terminus of an oligonucleotide. Chemical phosphorylation is a cost effective alternative to enzymatic phosphorylation methods, allowing introduction of terminal phosphate groups in high yields, at any desired scale.

SAFC Proligo Reagents’ offers Phosphate-ON phosphoramidite in powder form, enabling the dissolution of the reagent in acetonitrile to be easily monitored. The application of the reagent is fully compatible with standard cleavage and deprotection procedures at the end of oligonucleotide synthesis. Phosphate-ON phosphoramidite from Proligo Reagents comprises a thymidine nucleoside, which is removed from the oligonucleotide during the cleavage and deprotection process.
 
Download Literature:
•  User Instructions
Phosphate-ON Phosphoramidite
(668k pdf)
View Structure:
•  Phosphate-ON Phosphoramidite

Key Features of 5’-Phosphorylated Oligonucleotides

Enables enzymatic ligation to the 3'- terminus of nucleic acids

Offers protection against exonucleolytic degradation

Provides oligonucleotide conjugation through activation with coupling reagents such as EDC

These features enable 5’-phosphorylated oligonucleotides to be used in applications such as molecular cloning and gene construction; ligase chain reaction; template directed ligation; oligonucleotide labeling with reporter groups, haptens and other modifiers; and oligonucleotide stabilization.

Key Features of Phosphate-ON Phosphoramidite

Fully compatible with standard phosphoramidite reagents and synthesis conditions

Compatible with dG(dmf) fast deprotection chemistry: the oligonucleotide can be cleaved from the support and deprotected in concentrated ammonia at 55°C in only 2 hours

Comprises a DMT-group for trityl monitoring

Dissolves easily in acetonitrile to a 0.1M solution

Powder format enables dissolution to be easily monitored and facilitates product handling

High coupling efficiency of ≥ 98.0% under standard DNA phosphoramidite coupling conditions

Cleavage of both phosphate protective groups through a β-elimination process

Phosphate on Phosphoramidite
Compatible with Expedite™ and Polygen® Instruments
Product No. Description Unit
M010782-01 Phosphate-ON amidite  
Compatible with ABI™ Instruments
M010732-01 Phosphate-ON amidite  

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